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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | orange1.1g043432m | ||||||||
Common Name | CISIN_1g043432mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | B3 | ||||||||
Protein Properties | Length: 105aa MW: 12745.8 Da PI: 8.9738 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 44.7 | 2.4e-14 | 11 | 97 | 1 | 83 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+l++sdv++ gr+vlpkk ae++ +++ ++ + led +++W++k+++ ++ +gr+++ ++++ F k L+ gD ++ + orange1.1g043432m 11 FEKQLKNSDVNAAGRIVLPKKLAETYlpPVNEKAGFWMHLEDmDFNKVWTFKFRFwpNN-RGRMYIFENTRAFIKRYCLELGDYIMVY 97 99*************************9666668899*****5556*******995333.44455566***************99887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 7.6E-22 | 8 | 100 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.36E-17 | 9 | 105 | No hit | No description |
SuperFamily | SSF101936 | 1.44E-19 | 9 | 99 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 9.009 | 11 | 105 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 2.4E-7 | 11 | 104 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 5.9E-11 | 11 | 97 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence Send to blast |
EINPFLMRFL FEKQLKNSDV NAAGRIVLPK KLAETYLPPV NEKAGFWMHL EDMDFNKVWT 60 FKFRFWPNNR GRMYIFENTR AFIKRYCLEL GDYIMVYKDE LEGSY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006438851.1 | 2e-73 | hypothetical protein CICLE_v10033303mg, partial | ||||
Refseq | XP_015387151.1 | 3e-73 | PREDICTED: uncharacterized protein LOC107177608 | ||||
Swissprot | Q9LW31 | 1e-34 | FUS3_ARATH; B3 domain-containing transcription factor FUS3 | ||||
TrEMBL | A0A067H654 | 6e-74 | A0A067H654_CITSI; Uncharacterized protein (Fragment) | ||||
TrEMBL | V4TQE1 | 2e-73 | V4TQE1_9R | ||||
STRING | GSMUA_Achr3P32440_001 | 4e-35 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM22753 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26790.1 | 6e-36 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | orange1.1g043432m |